Emi Tanaka
Work Experience
Department of Econometrics and Business Statistics
School of Mathematics and Statistics
School of Mathematics and Applied Statistics
Education
Statistical Methods for Improving Motif Evaluation
Supervisor: Dr. Uri Keich
School of Mathematics and Statistics
The University of Sydney, Sydney, Australia, 2015
Major in Mathematics and Statistics
The University of Sydney, Sydney, Australia, 2010
Publications
- Morota, G, Cheng, H, Cook, D, & Tanaka, E (2021) ASAS-NANP SYMPOSIUM: Prospects for interactive and dynamic graphics in the era of data-rich animal science. Journal of animal science, 99(2). Citations: 1.
- Tanaka, E (2020) Simple outlier detection for a multi-environmental field trial. Biometrics, 76(4), 1374-1382. Citations: 4.
- Tanaka, E & Hui, F (2019) Symbolic formulae for linear mixed models. Statistics and data science, 3-21
- Hui, F, Tanaka, E, & Warton, D (2018) Order selection and sparsity in latent variable models via the ordered factor LASSO. Biometrics, 74(4), 1311-1319. Citations: 6.
- Norman, A, Taylor, J, Tanaka, E, Telfer, P, Edwards, J, Martinant, J, & Kuchel, H (2017) Increased genomic prediction accuracy in wheat breeding using a large australian panel. Theoretical and applied genetics, 130(12), 2543-2555. Citations: 16.
- Tanaka, E, Ral, J, Li, S, Gaire, R, Cavanagh, C, Cullis, B, & Whan, A (2017) Increased accuracy of starch granule type quantification using mixture distributions. Plant methods, 13, 107. Citations: 5.
- Tanaka, E (2014) Statistical methods for improving motif evaluation. PhD Thesis
- Tanaka, E, Bailey, T, & Keich, U (2014) Improving MEME via a two-tiered significance analysis. Bioinformatics, 30(14), 1965-1973. Citations: 17.
- Liachko, I, Tanaka, E, Cox, K, Chung, S, Yang, L, Seher, A, Hallas, L, Cha, E, Kang, G, Pace, H, Barrow, J, Inada, M, Tye, B, & Keich, U (2011) Novel features of ARS selection in budding yeast lachancea kluyveri. BMC genomics, 12, 633. Citations: 22.
- Tanaka, E, Bailey, T, Grant, C, Noble, W, & Keich, U (2011) Improved similarity scores for comparing motifs. Bioinformatics, 27(12), 1603-1609. Citations: 49.
Citation counts are sourced from Google Scholar at 2021-03-31.
Software
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edibble
An R-package that implements the grammar of experimental design.
Creator and maintainer. GitHub stars: 123
Source: https://github.com/emitanaka/edibble
Documentation: https://edibble.emitanaka.org -
anicon
An R-package to insert animated icons for R markdown and Shiny apps.
Creator. GitHub stars: 109
Source: https://github.com/emitanaka/anicon -
nestr
An R-package to build hierarchical or nested sturctures.
Creator and maintainer. GitHub stars: 11
Source: https://github.com/emitanaka/nestr
Documentation: https://nestr.emitanaka.org -
monash
A utility R-package with consolidated tools and templates for staffs at Monash University.
Creator and maintainer. GitHub stars: 3
Source: https://github.com/numbats/monash -
xaringan
An R package for creating slideshows with remark.js through R Markdown.
Contributor. My contribution is the adaptation of the ninja-theme shown in the Documentation. GitHub stars: 1144
Source: https://github.com/yihui/xaringan
Documentation: https://github.com/emitanaka/ninja-theme -
gghdr
Plots of highest density regions (HDR) for ggplot2.
Listed as author but my contribution is small. GitHub stars: 34
Source: https://github.com/ropenscilabs/gghdr
Documentation: https://ropenscilabs.github.io/gghdr -
shinycustomloader
Add a custom loader for R shiny.
Creator. GitHub stars: 98
Source: https://github.com/emitanaka/shinycustomloader -
datalegreyar
Datalegreya, the typeface that melts text and data visualisation, for R markdown.
Creator. GitHub stars: 38
Source: https://github.com/emitanaka/datalegreyar -
Tomtom
A motif comparison tool part of the MEME Suite.
The -incomplete-scores is an implementation as a result of Tanaka et al. (2011).Documentation: https://meme-suite.org/meme/doc/tomtom.html
Talks
List of talks (and links to the slides if available) are at https://emitanaka.org/talks.html.
Below show the last 10 talks.
Workshops
Service
Professional memberships
- Statistical Society of Australia
- International Biometrics Society